Information of ICE
| ICEberg ID | 4 |
|---|---|
| ICE Name | CTnERL |
| ICEO ID | ICEO_0000700 |
| Organism | Bacteroides fragilis |
| Size | ~52 kb |
| GC Content (%) | - |
| Insertion site | Few sites |
| Function | - |
| Species that ICE can be transferred to | Bacteroides spp. |
| Nucleotide Sequence | - |
| Coordinates | - |
| Putative oriT region | - |
| Putative relaxase | - |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The Interaction Network among ICE/IME/CIME
Detailed Informatioin of the Interaction Network
| # | ICE | Inter_Ele [Type] | Methods | Donors | Recipients | Exper_Ref |
|---|---|---|---|---|---|---|
| 1 | CTnERL | ermF region [IME] |  in trans | Bacteroides thetaiotaomicron | Bacteroides thetaiotaomicron | 11472924 |
| 2 | CTnERL | NBU1 [IME] | in trans | Bacteroides uniformis | Bacteroides thetaiotaomicron 5482; Escherichia coli | 8407835;7608064 |
| 3 | CTnERL | NBU2 [IME] | in trans | Bacteroides fragilis; Bacteroides uniformis; Bacteroides thetaiotaomicron | Bacteroides thetaiotaomicron 5482; Bacteroides uniformis; Escherichia coli | 8407835;7608064;10852890 |
| (1) Bedzyk LA, Shoemaker NB, Young KE, Salyers AA. (1992) Insertion and excision of Bacteroides conjugative chromosomal elements. J Bacteriol. 1992 Jan;174(1):166-72. [PubMed:1309516] |
| (2) Valentine PJ, Shoemaker NB, Salyers AA. (1988) Mobilization of Bacteroides plasmids by Bacteroides conjugal elements. J Bacteriol. 1988 Mar;170(3):1319-24. [PubMed:3343220] |
| (3) Bonheyo GT, Hund BD, Shoemaker NB, Salyers AA. (2001) Transfer region of a Bacteroides conjugative transposon contains regulatory as well as structural genes. Plasmid. 2001 Nov;46(3):202-9. [PubMed:11735369] |
| (4) Whittle G, Hamburger N, Shoemaker NB, Salyers AA. (2006) A bacteroides conjugative transposon, CTnERL, can transfer a portion of itself by conjugation without excising from the chromosome. J Bacteriol. 2006 Feb;188(3):1169-74. [PubMed:16428422] |