Information of ICE
| ICEberg ID | 2 |
|---|---|
| ICE Name | CTn341 |
| ICEO ID | ICEO_0000100 |
| Organism | Bacteroides fragilis |
| Size | 51993 bp |
| GC Content (%) | 49.49 |
| Insertion site | - |
| Function | R Tetracycline |
| Species that ICE can be transferred to | Bacteroides spp. |
| Nucleotide Sequence | AY515263 (complete ICE sequence in this GenBank file) |
| Coordinates | 1..51993 |
| Putative oriT region | - |
| Putative relaxase | coordinates: 19916..21163; Family: MOBP |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of CTn341 components from AY515263
Complete gene list of CTn341 from AY515263
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The Interaction Network among ICE/IME/CIME
Detailed Informatioin of the Interaction Network
| # | ICE | Inter_Ele [Type] | Methods | Donors | Recipients | Exper_Ref |
|---|---|---|---|---|---|---|
| 1 | CTn341 | Tn4555 [IME] |  in trans | Bacteroides vulgatus | Escherichia coli | 14702313 |
| (1) Smith CJ, Parker AC, Bacic M. (2001) Analysis of a Bacteroides conjugative transposon using a novel "targeted capture" model system. Plasmid. 2001 Jul;46(1):47-56. [PubMed:11535035] |
| (2) Bacic M, Parker AC, Stagg J, Whitley HP, Wells WG, Jacob LA, Smith CJ. (2005) Genetic and structural analysis of the Bacteroides conjugative transposon CTn341. J Bacteriol. 2005 Apr;187(8):2858-69. [PubMed:15805532] |
| (3) Peed L, Parker AC, Smith CJ. (2010) Genetic and functional analyses of the mob operon on conjugative transposon CTn341 from Bacteroides spp. J Bacteriol. 2010 Sep;192(18):4643-50. [PubMed:20639338] |