Information of ICE
| ICEberg ID | 75 |
|---|---|
| ICE Name | ICEMlSym(R7A) |
| ICEO ID | ICEO_0000703 |
| Organism | Mesorhizobium loti R7A |
| Size | 501818 bp |
| GC Content (%) | 59.3 |
| Insertion site | tRNA-Phe |
| Function | S Symbiosis D Gao D Mokosh D Phage defense system D Restriction-Modification D Septu V Virulence factor |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | CP033366.1 (partial ICE sequence) |
| Coordinates | 5899546..6401363 |
| Putative oriT region | - |
| Putative relaxase | coordinates: 131520..133490; Family: MOBL |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICEMlSym(R7A) components from CP033366.1
Complete gene list of ICEMlSym(R7A) from CP033366.1
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICEMlSym(R7A) is not available.
| (1) Sullivan JT, Ronson CW. (1998) Evolution of rhizobia by acquisition of a 500-kb symbiosis island that integrates into a phe-tRNA gene. Proc Natl Acad Sci U S A. 1998 Apr 28;95(9):5145-9. [PubMed:9560243] |
| (2) Sullivan JT, Ronson CW. (1998) Evolution of rhizobia by acquisition of a 500-kb symbiosis island that integrates into a phe-tRNA gene. Proc Natl Acad Sci U S A. 1998 Apr 28;95(9):5145-9. [PubMed:9560243] |
| (3) Kaneko T, Nakamura Y, Sato S, Asamizu E, Kato T, Sasamoto S, Watanabe A, Idesawa K, Ishikawa A, Kawashima K, Kimura T, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Mochizuki Y, Nakayama S, Nakazaki N, Shimpo S, Sugimoto M, Takeuchi C, Yamada M, Tabata S. (2000) Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti. DNA Res. 2000 Dec 31;7(6):331-8. [PubMed:11214968] |
| (4) Sullivan JT, Trzebiatowski JR, Cruickshank RW, Gouzy J, Brown SD, Elliot RM, Fleetwood DJ, McCallum NG, Rossbach U, Stuart GS, Weaver JE, Webby RJ, De Bruijn FJ, Ronson CW. (2002) Comparative sequence analysis of the symbiosis island of Mesorhizobium loti strain R7A. J Bacteriol. 2002 Jun;184(11):3086-95. [PubMed:12003951] |
| (5) Ramsay JP, Sullivan JT, Stuart GS, Lamont IL, Ronson CW. (2006) Excision and transfer of the Mesorhizobium loti R7A symbiosis island requires an integrase IntS, a novel recombination directionality factor RdfS, and a putative relaxase RlxS. Mol Microbiol. 2006 Nov;62(3):723-34. [PubMed:17076666] |
| (6) Ramsay JP, Sullivan JT, Jambari N, Ortori CA, Heeb S, Williams P, Barrett DA, Lamont IL, Ronson CW. (2009) A LuxRI-family regulatory system controls excision and transfer of the Mesorhizobium loti strain R7A symbiosis island by activating expression of two conserved hypothetical genes. Mol Microbiol. 2009 Sep;73(6):1141-55. [PubMed:19682258] |