Information of ICE
| ICEberg ID | 47 |
|---|---|
| ICE Name | Tn5251 (part of Tn5253) |
| ICEO ID | ICEO_0000357 |
| Organism | Streptococcus pneumoniae DP1322 |
| Size | 18033 bp |
| GC Content (%) | 38.85 |
| Insertion site | AT rich regions |
| Function | R Tetracycline |
| Species that ICE can be transferred to | Streptococcus pneumoniae; Streptococcus gordonii; Streptococcus pyogenes; Streptococcus agalactiae;Enterococcus faecalis; Bacillus subtilis |
| Nucleotide Sequence | FJ711160 (complete ICE sequence in this GenBank file) |
| Coordinates | 1..18033 |
| Putative oriT region | coordinates: 15400..15532; oriTDB id: 200001 ATGTCAACTTTTAAAGCCCATTTGACATACGCTGAAATTTTGTAAATCCCTTGTAACCAA AGGATTTTCTAATGTTTTTTTGACTGTTTCCTGTCGATTTGTACCCCCCTGTTAGATACG GGGGGTTAAGT |
| Putative relaxase | coordinates: 14184..15389; Family: MOBT |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of Tn5251 (part of Tn5253) components from FJ711160
Complete gene list of Tn5251 (part of Tn5253) from FJ711160
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of Tn5251 (part of Tn5253) is not available.
| (1) Ayoubi P, Kilic AO, Vijayakumar MN. (1991) Tn5253, the pneumococcal omega (cat tet) BM6001 element, is a composite structure of two conjugative transposons, Tn5251 and Tn5252. J Bacteriol. 1991 Mar;173(5):1617-22. [PubMed:1847905] |
| (2) Provvedi R, Manganelli R, Pozzi G. (1996) Characterization of conjugative transposon Tn5251 of Streptococcus pneumoniae. FEMS Microbiol Lett. 1996 Jan 15;135(2-3):231-6. [PubMed:8595862] |
| (3) Santoro F, Oggioni MR, Pozzi G, Iannelli F. (2010) Nucleotide sequence and functional analysis of the tet (M)-carrying conjugative transposon Tn5251 of Streptococcus pneumoniae. FEMS Microbiol Lett. 2010 Jul;308(2):150-8. [PubMed:20487027] |