Information of ICE
| ICEberg ID | 35 |
|---|---|
| ICE Name | ICEVchVie1 |
| ICEO ID | ICEO_0000639 |
| Organism | Vibrio cholerae V21 |
| Size | 23402 bp |
| GC Content (%) | - |
| Insertion site | prfC |
| Function | R Aminoglycoside, Phenicol, Sulphonamide, Tetracycline M Metal resistance |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | AB114188 (partial ICE sequence) |
| Coordinates | 1..23402 |
| Putative oriT region | coordinates: 2860..2966; oriTDB id: 200056 TCGAGACGCCAAACAGTGATTGTGACGGCAGTTTTACGTTTGGCGTTTCGATCCAAAAGC CAAACGGATAGTGGTTTTGGCTTTAGGGGTTAATTGGATGGGGAA |
| Putative relaxase | - |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICEVchVie1 components from AB114188
Complete gene list of ICEVchVie1 from AB114188
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICEVchVie1 is not available.
| (1) Ceccarelli D, Daccord A, René M, Burrus V. (2008) Identification of the origin of transfer (oriT) and a new gene required for mobilization of the SXT/R391 family of integrating conjugative elements. J Bacteriol. 2008 Aug;190(15):5328-38. [PubMed:18539733] |