Information of ICE
| ICEberg ID | 313 |
|---|---|
| ICE Name | ICESsu98HAH33-1 |
| ICEO ID | - |
| Organism | Streptococcus suis 98HAH33 |
| Size | 18031 bp |
| GC Content (%) | 38.79[41.11] |
| Insertion site | AT rich regions |
| Function | R Tetracycline |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | CP000408 (complete ICE sequence in this genome) |
| Coordinates | 887958..905988 |
| Putative oriT region | coordinates: 15399..15531; oriTDB id: 200001 ATGTCAACTTTTAAAGCCCATTTGACATACGCTGAAATTTTGTAAATCCCTTGTAACCAA AGGATTTTCTAATGTTTTTTTGACTGTTTCCTGTCGATTTGTACCCCCCTGTTAGATACG GGGGGTTAAGT |
| Putative relaxase | coordinates: 902140..903345; Family: MOBT |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICESsu98HAH33-1 components from CP000408
Complete gene list of ICESsu98HAH33-1 from CP000408
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICESsu98HAH33-1 is not available.
| (1) Chen C, Tang J, Dong W, Wang C, Feng Y, Wang J, Zheng F, Pan X, Liu D, Li M, Song Y, Zhu X, Sun H, Feng T, Guo Z, Ju A, Ge J, Dong Y, Sun W, Jiang Y, Wang J, Yan J, Yang H, Wang X, Gao GF, Yang R, Wang J, Yu J. (2007) A glimpse of streptococcal toxic shock syndrome from comparative genomics of S. suis 2 Chinese isolates. PLoS One. 2007 Mar 21;2(3):e315. [PubMed:17375201] |