Information of ICE
| ICEberg ID | 305 |
|---|---|
| ICE Name | ICESauST398-1 |
| ICEO ID | - |
| Organism | Staphylococcus aureus subsp. aureus ST398 |
| Size | 18032 bp |
| GC Content (%) | 38.74[32.92] |
| Insertion site | AT rich regions |
| Function | R Tetracycline |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | AM990992 (complete ICE sequence in this genome) |
| Coordinates | 997771..1015802 |
| Putative oriT region | coordinates: 15400..15532; oriTDB id: 200001 ATGTCAACTTTTAAAGCCCATTTGACATACGCTGAAATTTTGTAAATCCCTTGTAACCAA AGGATTTTCTAATGTTTTTTTGACTGTTTCCTGTCGATTTGTACCCCCCTGTTAGATACG GGGGGTTAAGT |
| Putative relaxase | coordinates: 1011954..1013159; Family: MOBT |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICESauST398-1 components from AM990992
Complete gene list of ICESauST398-1 from AM990992
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICESauST398-1 is not available.
| (1) Schijffelen MJ, Boel CH, van Strijp JA, Fluit AC. (2010) Whole genome analysis of a livestock-associated methicillin-resistant Staphylococcus aureus ST398 isolate from a case of human endocarditis. BMC Genomics. 2010 Jun 14;11:376. [PubMed:20546576] |