Information of ICE
| ICEberg ID | 304 |
|---|---|
| ICE Name | ICESga43143-1 |
| ICEO ID | - |
| Organism | Streptococcus gallolyticus subsp. gallolyticus ATCC 43143 |
| Size | 18032 bp |
| GC Content (%) | 38.75[37.52] |
| Insertion site | AT rich regions |
| Function | R Tetracycline |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | AP012053 (complete ICE sequence in this genome) |
| Coordinates | 1643376..1661407 |
| Putative oriT region | coordinates: 15400..15532; oriTDB id: 200001 ATGTCAACTTTTAAAGCCCATTTGACATACGCTGAAATTTTGTAAATCCCTTGTAACCAA AGGATTTTCTAATGTTTTTTTGACTGTTTCCTGTCGATTTGTACCCCCCTGTTAGATACG GGGGGTTAAGT |
| Putative relaxase | coordinates: 1657559..1658764; Family: MOBT |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICESga43143-1 components from AP012053
Complete gene list of ICESga43143-1 from AP012053
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICESga43143-1 is not available.
| (1) Lin IH, Liu TT, Teng YT, Wu HL, Liu YM, Wu KM, Chang CH, Hsu MT. (2011) Sequencing and comparative genome analysis of two pathogenic Streptococcus gallolyticus subspecies: genome plasticity, adaptation and virulence. PLoS One. 2011;6(5):e20519. [PubMed:21633709] |