Information of ICE
| ICEberg ID | 209_IME |
|---|---|
| ICE Name | SGI1-F |
| ICEO ID | - |
| Organism | Salmonella enterica serovar Cerro SRC5 |
| Size | 42650 bp |
| GC Content (%) | 48.97 |
| Insertion site | 3'-end of the trmE |
| Function | R Beta-lactam, Disinfectant, Folate pathway antagonist, Phenicol, Sulphonamide, Tetracycline D GABIJA |
| Species that ICE can be transferred to | Escherichia coli UB1637 |
| Nucleotide Sequence | KU847976 (complete IME sequence in this contig) |
| Coordinates | 915..43564 |
| Putative oriT region | - |
| Putative relaxase | - |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of SGI1-F components from KU847976
Complete gene list of SGI1-F from KU847976
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The Interaction Network among ICE/IME/CIME
Detailed Informatioin of the Interaction Network
| # | ICE | Inter_Ele [Type] | Methods | Donors | Recipients | Exper_Ref |
|---|---|---|---|---|---|---|
| 1 | SGI1-F | pN418 [IncA/C plasmid] |  in trans | Salmonella enterica | Escherichia coli | 21187963 |
| 2 | SGI1-F | pAM04528 [IncA/C plasmid] | in trans | Salmonella enterica | Escherichia coli | 21187963 |
| 3 | SGI1-F | pR55 [IncA/C plasmid] | in trans | Salmonella enterica | Escherichia coli | 21187963 |
| 4 | SGI1-F | pRMH760 [IncC plasmid] | in trans | Salmonella enterica | Escherichia coli | 27620651 |
| (1) Douard G, Praud K, Cloeckaert A, Doublet B. (2010) The Salmonella genomic island 1 is specifically mobilized in trans by the IncA/C multidrug resistance plasmid family. PLoS One. 2010 Dec 20;5(12):e15302. [PubMed:21187963] |
| (2) Harmer CJ, Hamidian M, Ambrose SJ, Hall RM. (2016) Destabilization of IncA and IncC plasmids by SGI1 and SGI2 type Salmonella genomic islands. Plasmid. 2016 Sep-Nov;87-88:51-57. [PubMed:27620651] |
| (3) Schultz E, Barraud O, Madec JY, Haenni M, Cloeckaert A, Ploy MC, Doublet B. (2017) Multidrug Resistance Salmonella Genomic Island 1 in a Morganella morganii subsp. morganii Human Clinical Isolate from France. mSphere. 2017 Apr 19;2(2):e00118-17. [PubMed:28435889] |