Information of ICE
| ICEberg ID | 1938 |
|---|---|
| ICE Name | ICEVchRua1 |
| ICEO ID | - |
| Organism | Vibrio Cholerae RND68789 |
| Size | 97915 bp |
| GC Content (%) | 46.73 |
| Insertion site | - |
| Function | D Abortive infection/Phage exclusion systems R Aminoglycoside, Phenicol, Sulphonamide D Bacteriophage Exclusion |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | KY382507.1 (complete ICE sequence in this GenBank file) |
| Coordinates | 1..97915 |
| Putative oriT region | coordinates: 91941..92047; oriTDB id: 200056 CCCCATCCAATTAACCCCTAAAGCCAAAACCACTATCCGTTTGGCTTTTGGATCGAAACG CCAAACGTAAAACTGCCGTCACAATCACTGTTTGGCGTCTCGATA |
| Putative relaxase | coordinates: 53870..56021; Family: MOBH |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICEVchRua1 components from KY382507.1
Complete gene list of ICEVchRua1 from KY382507.1
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICEVchRua1 is not available.
| (1) Kuleshov KV, Kostikova A, Pisarenko SV, Kovalev DA, Tikhonov SN, SavelievŠ° IV, Saveliev VN, Vasilieva OV, Zinich LS, Pidchenko NN, Kulichenko AN, Shipulin GA. (2016) Comparative genomic analysis of two isolates of Vibrio cholerae O1 Ogawa El Tor isolated during outbreak in Mariupol in 2011. Infect Genet Evol. 2016 Oct;44:471-478. [PubMed:27480918] |