Information of ICE
| ICEberg ID | 1935 |
|---|---|
| ICE Name | ICEVchChn1307 |
| ICEO ID | - |
| Organism | Vibrio cholerae ICDC-1307 |
| Size | 104025 bp |
| GC Content (%) | 47.97 |
| Insertion site | - |
| Function | D Abortive infection/Phage exclusion systems R Aminoglycoside, Phenicol, Sulphonamide, Tetracycline D GABIJA D Restriction-Modification |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | KJ817376.1 (complete ICE sequence in this GenBank file) |
| Coordinates | 1..104025 |
| Putative oriT region | coordinates: 98018..98124; oriTDB id: 200056 CCCCATCCAATTAACCCCTAAAGCCAAAACCACTATCCGTTTGGCTTTTGGATCGAAACG CCAAACGTAAAACTGCCGTCACAATCACTGTTTGGCGTCTCGATA |
| Putative relaxase | coordinates: 52979..55130; Family: MOBH |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICEVchChn1307 components from KJ817376.1
Complete gene list of ICEVchChn1307 from KJ817376.1
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICEVchChn1307 is not available.
| (1) Wang R, Yu D, Yue J, Kan B. (2016) Variations in SXT elements in epidemic Vibrio cholerae O1 El Tor strains in China. Sci Rep. 2016 Mar 9;6:22733. [PubMed:26956038] |