Information of ICE
| ICEberg ID | 1915 |
|---|---|
| ICE Name | ICETET |
| ICEO ID | - |
| Organism | Vibrio cholerae strain IDH_1986 |
| Size | 91463 bp |
| GC Content (%) | 46.58 |
| Insertion site | - |
| Function | D Abortive infection/Phage exclusion systems R Aminoglycoside, Folate pathway antagonist, Sulphonamide, Tetracycline D Restriction-Modification |
| Species that ICE can be transferred to | E. coli J53 |
| Nucleotide Sequence | MK165649.1 (complete ICE sequence in this GenBank file) |
| Coordinates | 1..91463 |
| Putative oriT region | coordinates: 5017..5123; oriTDB id: 200056 TCGAGACGCCAAACAGTGATTGTGACGGCAGTTTTACGTTTGGCGTTTCGATCCAAAAGC CAAACGGATAGTGGTTTTGGCTTTAGGGGTTAATTGGATGGGGAA |
| Putative relaxase | coordinates: 36346..38497; Family: MOBH |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICETET components from MK165649.1
Complete gene list of ICETET from MK165649.1
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICETET is not available.
| (1) Sarkar A, Morita D, Ghosh A, Chowdhury G, Mukhopadhyay AK, Okamoto K, Ramamurthy T (2019) Altered Integrative and Conjugative Elements (ICEs) in Recent Vibrio cholerae O1 Isolated From Cholera Cases, Kolkata, India. Front Microbiol. 2019 Sep 6;10:2072. [PubMed:31555253] |