Information of ICE
| ICEberg ID | 1914 |
|---|---|
| ICE Name | ICESupCHN110003 |
| ICEO ID | - |
| Organism | Shewanella upenei |
| Size | 91669 bp |
| GC Content (%) | 46.28 |
| Insertion site | - |
| Function | R Aminoglycoside, Phenicol, Sulphonamide D GABIJA D Restriction-Modification |
| Species that ICE can be transferred to | E. coli SM10 |
| Nucleotide Sequence | MG014393.1 (complete ICE sequence in this GenBank file) |
| Coordinates | 1..91669 |
| Putative oriT region | coordinates: 5822..5928; oriTDB id: 200056 TCGAGACGCCAAACAGTGATTGTGACGGCAGTTTTACGTTTGGCGTTTCGATCCAAAAGC CAAACGGATAGTGGTTTTGGCTTTAGGGGTTAATTGGATGGGGAA |
| Putative relaxase | coordinates: 37217..39368; Family: MOBH |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICESupCHN110003 components from MG014393.1
Complete gene list of ICESupCHN110003 from MG014393.1
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICESupCHN110003 is not available.
| (1) Fang Y, Wang Y, Li Z, Liu Z, Li X, Diao B, Kan B, Wang D (2018) Distribution and Genetic Characteristics of SXT/R391 Integrative Conjugative Elements in Shewanella spp. From China. Front Microbiol. 2018 May 11;9:920. [PubMed:29867831] |