Information of ICE
| ICEberg ID | 1762 |
|---|---|
| ICE Name | ICEPflCDM8 |
| ICEO ID | - |
| Organism | Pseudoalteromonas flavipulchra CDM8 |
| Size | 110093 bp |
| GC Content (%) | 48.61[43.48] |
| Insertion site | prfC |
| Function | D Abortive infection/Phage exclusion systems R Aminoglycoside, Folate pathway antagonist, Macrolide, Phenicol, Sulphonamide, Tetracycline D KIWA D Phage defense system D PrrC D Restriction-Modification |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | CP047240.1 (complete ICE sequence in this GenBank file) |
| Coordinates | 950152..1060244 |
| Putative oriT region | coordinates: 3694..3800; oriTDB id: 200056 TCGAGACGCCAAACAGTGATTGTGACGGCAGTTTTACGTTTGGCGTTTCGATCCAAAAGC CAAACGGATAGTGGTTTTGGCTTTAGGGGTTAATTGGATGGGGAA |
| Putative relaxase | coordinates: 992981..995132; Family: MOBH |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICEPflCDM8 components from CP047240.1
Complete gene list of ICEPflCDM8 from CP047240.1
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICEPflCDM8 is not available.
| (1) Wang H, Sun B, Xie G, Wan X, Huang J, Song X (2021) Spotlight on a novel bactericidal mechanism and a novel SXT/R391-like integrative and conjugative element, carrying multiple antibiotic resistance genes, in Pseudoalteromonas flavipulchra strain CDM8. Microbiol Res. 2021 Jan;242:126598. [PubMed:33039801] |