Information of ICE
| ICEberg ID | 1756 |
|---|---|
| ICE Name | ICEPcc2 |
| ICEO ID | - |
| Organism | Pectobacterium carotovorum BP201601.1 |
| Size | 66304 bp |
| GC Content (%) | 51.34[52.17] |
| Insertion site | tRNA-asn |
| Function | D HACHIMAN D Restriction-Modification D Septu |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | CP034236.1 (complete ICE sequence in this GenBank file) |
| Coordinates | 1663873..1730176 |
| Putative oriT region | coordinates: 32355..32477; oriTDB id: 200012 CGGCACACCGTCTCACGCTACGCGCGACCAACCCCTTTAAGACGCGCGTTTCGCCTGTTT TTTCTCGCAAGCTCCAAAAAACGGGAACGCTGCTTTAAAGGGGTTGGTCGCGCCTGATCG G |
| Putative relaxase | coordinates: 1693363..1694167; Family: MOBC |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICEPcc2 components from CP034236.1
Complete gene list of ICEPcc2 from CP034236.1
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICEPcc2 is not available.
| (1) de Assis JCS, Gonçalves OS, Fernandes AS, de Queiroz MV, Bazzolli DMS, Santana MF (2022) Genomic analysis reveals the role of integrative and conjugative elements in plant pathogenic bacteria. Mob DNA. 2022 Aug 12;13(1):19. [PubMed:35962419] |