Information of ICE
| ICEberg ID | 1754 |
|---|---|
| ICE Name | ICEPca4 |
| ICEO ID | - |
| Organism | Pectobacterium atrosepticum 36A |
| Size | 45913 bp |
| GC Content (%) | 46.86[51.08] |
| Insertion site | tRNA-asn |
| Function | D DRT D HACHIMAN |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | CP024956.1 (complete ICE sequence in this GenBank file) |
| Coordinates | 1863011..1908923 |
| Putative oriT region | coordinates: 24409..24539; oriTDB id: 200013 CGGCACACCGTCGCCCGCTACGCGCGACCAACCCCTTTAAGACGGTCGCTTTTGCCTTTT TATTCCCTTTGCTCGTTCCTCGCAGCGTGAATAAAAGGGAAGCTGACCTTTAAAGGGGTT GGTCGCGCC |
| Putative relaxase | coordinates: 1884544..1885291; Family: MOBC |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICEPca4 components from CP024956.1
Complete gene list of ICEPca4 from CP024956.1
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICEPca4 is not available.
| (1) de Assis JCS, Gonçalves OS, Fernandes AS, de Queiroz MV, Bazzolli DMS, Santana MF (2022) Genomic analysis reveals the role of integrative and conjugative elements in plant pathogenic bacteria. Mob DNA. 2022 Aug 12;13(1):19. [PubMed:35962419] |