Information of ICE
| ICEberg ID | 1598 |
|---|---|
| ICE Name | ICEAplChn1 |
| ICEO ID | - |
| Organism | Actinobacillus pleuropneumoniae app6 |
| Size | 100848 bp |
| GC Content (%) | 46.56 |
| Insertion site | prfC |
| Function | D Abortive infection/Phage exclusion systems R Aminoglycoside, Macrolide, Lincosamide, Streptogramin B, Phenicol, Sulphonamide, Tetracycline D CBASS D GABIJA D Restriction-Modification |
| Species that ICE can be transferred to | Escherichia coli EC600; A. pleuropneumoniae app10R30 (serovar 7); Haemophilus parasuis D20R30 |
| Nucleotide Sequence | KX196444.1 (complete ICE sequence in this GenBank file) |
| Coordinates | 1..100848 |
| Putative oriT region | coordinates: 6353..6459; oriTDB id: 200056 TCGAGACGCCAAACAGTGATTGTTACGGTAGTTTTACGTTTGGCGTTTCGATCCAAAAGC CAAACGGATAGTGGTTTTGGCTTTTGGGGTTAATTGGATGGGGAA |
| Putative relaxase | coordinates: 47513..49664; Family: MOBH |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICEAplChn1 components from KX196444.1
Complete gene list of ICEAplChn1 from KX196444.1
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICEAplChn1 is not available.
| (1) Xu J, Jia H, Cui G, Tong H, Wei J, Shao D, Liu K, Qiu Y, Li B, Ma Z (2018) ICEAplChn1, a novel SXT/R391 integrative conjugative element (ICE), carrying multiple antibiotic resistance genes in Actinobacillus pleuropneumoniae. Vet Microbiol. 2018 Jul;220:18-23. [PubMed:29885796] |