Information of ICE
| ICEberg ID | 1596 |
|---|---|
| ICE Name | ICEAmaMED64 |
| ICEO ID | - |
| Organism | Alteromonas macleodii 'Aegean Sea MED64' |
| Size | 79835 bp |
| GC Content (%) | 46.01[44.83] |
| Insertion site | - |
| Function | D Restriction-Modification |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | CP004848.1 (complete ICE sequence in this GenBank file) |
| Coordinates | 1194615..1274449 |
| Putative oriT region | coordinates: 3071..3177; oriTDB id: 200056 TCGAGACGCCAAACAGTGATTGTTACGGCAGTTTTACGTTTGGCGTTTCGATCCAAAAGC CAAACGGATAGTGGTTTTGGCTTTTGGGGTTAATTGGATGGGGAA |
| Putative relaxase | coordinates: 1220250..1222401; Family: MOBH |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICEAmaMED64 components from CP004848.1
Complete gene list of ICEAmaMED64 from CP004848.1
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICEAmaMED64 is not available.
| (1) López-Pérez M, Gonzaga A, Rodriguez-Valera F. (2013) Genomic diversity of "deep ecotype" Alteromonas macleodii isolates: evidence for Pan-Mediterranean clonal frames. Genome Biol Evol. 2013;5(6):1220-32. [PubMed:23729633] |