Information of ICE
| ICEberg ID | 1551 |
|---|---|
| ICE Name | ICE_SsalN20_rpsI |
| ICEO ID | - |
| Organism | Streptococcus salivarius N20 |
| Size | 34385 bp |
| GC Content (%) | 34.81[40.03] |
| Insertion site | - |
| Function | D Nhi D Restriction-Modification |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | LR793272.1 (complete ICE sequence in this GenBank file) |
| Coordinates | 99454..133838 |
| Putative oriT region | coordinates: 12628..12840; oriTDB id: 200003 ATGGAAACACCTCCTTTTAATTAAGTGACACACTTTTTGGACCAAAGTGACACACTTTCT AAATCTTGAAATCCCAACTCCCACAAGGAATGAGGAGGGGTGGACGTGGCACTTTGGCCA AATGTAACCCCCCTATTAGAAATCGGGGGTTGAAGTCTCATCATGGCCTAGGAACTTCGG GCTACGGTCTGCGCCTGACCTGTGGTCAGGC |
| Putative relaxase | coordinates: 110847..112080; Family: MOBT |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICE_SsalN20_rpsI components from LR793272.1
Complete gene list of ICE_SsalN20_rpsI from LR793272.1
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICE_SsalN20_rpsI is not available.
| (1) Lao J, Guédon G, Lacroix T, Charron-Bourgoin F, Libante V, Loux V, Chiapello H, Payot S, Leblond-Bourget N (2020) Abundance, Diversity and Role of ICEs and IMEs in the Adaptation of Streptococcus salivarius to the Environment. Genes (Basel). 2020 Aug 26;11(9):999. [PubMed:32858915] |