Information of ICE
| ICEberg ID | 1528 |
|---|---|
| ICE Name | ICE_SsalF1-4_fda |
| ICEO ID | - |
| Organism | Streptococcus salivarius F1-4 |
| Size | 29736 bp |
| GC Content (%) | 35.33[39.75] |
| Insertion site | - |
| Function | D Restriction-Modification |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | LR797999.1 (complete ICE sequence in this GenBank file) |
| Coordinates | 2080530..2110265 |
| Putative oriT region | coordinates: 18355..18567; oriTDB id: 200003 CTGACCAAAGGTCAGGCGCAGACCGTAGCCCGAAGTTCCTAGGCCATGATGAGACTTCAA CCCCCGATTTCTAATAGGGGGGTTACATTTGGCCAAAGTGCCACGTCCACCCCTCCTCAT TCCTTGTGGGAGTTGGGATTTCAAGATTTAGAAAGTGTGTCACTTTGGTCCAAAAAGTGT GTCACTTAGTCAAAAGGAGGTGTTCCCATGA |
| Putative relaxase | coordinates: 2099096..2100329; Family: MOBT |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICE_SsalF1-4_fda components from LR797999.1
Complete gene list of ICE_SsalF1-4_fda from LR797999.1
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICE_SsalF1-4_fda is not available.
| (1) Lao J, Guédon G, Lacroix T, Charron-Bourgoin F, Libante V, Loux V, Chiapello H, Payot S, Leblond-Bourget N (2020) Abundance, Diversity and Role of ICEs and IMEs in the Adaptation of Streptococcus salivarius to the Environment. Genes (Basel). 2020 Aug 26;11(9):999. [PubMed:32858915] |