Information of ICE
| ICEberg ID | 15 |
|---|---|
| ICE Name | ICEVchBan8 |
| ICEO ID | - |
| Organism | Vibrio cholerae MZO-3 |
| Size | 103382 bp |
| GC Content (%) | 41.8 |
| Insertion site | tRNA-Ser |
| Function | D Abortive infection/Phage exclusion systems V Virulence factor |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | JQ345361 (complete ICE sequence in this GenBank file) |
| Coordinates | 1..103382 |
| Putative oriT region | coordinates: 6385..6491; oriTDB id: 200056 TCGAGACGCCAAACAGTGATTGTTACGGCAGTTTTACGTTTGGCGTTTCGATCCAAAAGC CAAACGGATAGTGGTTTTGGCTTTTGGGGTTAATTGGATGGGGAA |
| Putative relaxase | - |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICEVchBan8 components from JQ345361
Complete gene list of ICEVchBan8 from JQ345361
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICEVchBan8 is not available.
| (1) Wozniak RA, Fouts DE, Spagnoletti M, Colombo MM, Ceccarelli D, Garriss G, Déry C, Burrus V, Waldor MK. (2009) Comparative ICE genomics: insights into the evolution of the SXT/R391 family of ICEs. PLoS Genet. 2009 Dec;5(12):e1000786. [PubMed:20041216] |