Information of ICE
| ICEberg ID | 1490 |
|---|---|
| ICE Name | ICE_SsaFDA259_Tn916 |
| ICEO ID | - |
| Organism | Streptococcus salivarius strain FDAARGOS_259 |
| Size | 23303 bp |
| GC Content (%) | 37.67[40.14] |
| Insertion site | - |
| Function | R Macrolide, Lincosamide, Streptogramin B, Tetracycline |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | CP020451.2 (complete ICE sequence in this GenBank file) |
| Coordinates | 1792004..1815306 |
| Putative oriT region | coordinates: 2501..2633; oriTDB id: 200001 TTAACCCCCCGTATCTAACAGGGGGGTACAAATCGACAGGAAACAGTCAAAAAAACATTA GAAAATCCTTTGGTTACAAGGGATTTACAAAATTTCAGCGTATGTCAAATGGGCTTTAAA AGTTGACATAC |
| Putative relaxase | coordinates: 1794646..1795852; Family: MOBT |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICE_SsaFDA259_Tn916 components from CP020451.2
Complete gene list of ICE_SsaFDA259_Tn916 from CP020451.2
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICE_SsaFDA259_Tn916 is not available.
| (1) Guédon G, Lao J, Payot S, Lacroix T, Chiapello H, Leblond-Bourget N (2022) FirmiData: a set of 40 genomes of Firmicutes with a curated annotation of ICEs and IMEs. BMC Res Notes. 2022 May 10;15(1):157. [PubMed:35538580] |
| (2) Lao J, Lacroix T, Guédon G, Coluzzi C, Payot S, Leblond-Bourget N, Chiapello H. (2022) ICEscreen: a tool to detect Firmicute ICEs and IMEs, isolated or enclosed in composite structures. NAR Genom Bioinform. 2022 Oct 21;4(4):lqac079. [PubMed:36285285] |