Information of ICE
| ICEberg ID | 1096 |
|---|---|
| ICE Name | ICEMcSym(1271)-α |
| ICEO ID | ICEO_0000188 |
| Organism | Mesorhizobium ciceri WSM1271 |
| Size | 445221 bp |
| GC Content (%) | - |
| Insertion site | - |
| Function | S Symbiosis G Degradation V Virulence factor |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | NC_014923 (complete ICE sequence in this genome) |
| Coordinates | 5680050..6125270 |
| Putative oriT region | - |
| Putative relaxase | - |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICEMcSym(1271)-α components from NC_014923
Complete gene list of ICEMcSym(1271)-α from NC_014923
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICEMcSym(1271)-α is not available.
| (1) Reeve W, Nandasena K, Yates R, Tiwari R, O'Hara G, Ninawi M, Chertkov O, Goodwin L, Bruce D, Detter C, Tapia R, Han S, Woyke T, Pitluck S, Nolan M, Land M, Copeland A, Liolios K, Pati A, Mavromatis K, Markowitz V, Kyrpides N, Ivanova N, Goodwin L, Meenakshi U, Howieson J. (2013) Complete genome sequence of Mesorhizobium opportunistum type strain WSM2075(T.). Stand Genomic Sci. 2013 Dec 15;9(2):294-303. [PubMed:24976886] |
| (2) Reeve W, Nandasena K, Yates R, Tiwari R, O'Hara G, Ninawi M, Gu W, Goodwin L, Detter C, Tapia R, Han C, Copeland A, Liolios K, Chen A, Markowitz V, Pati A, Mavromatis K, Woyke T, Kyrpides N, Ivanova N, Howieson J. (2013) Complete genome sequence of Mesorhizobium australicum type strain (WSM2073(T)). Stand Genomic Sci. 2013 Dec 15;9(2):410-9. [PubMed:24976896] |
| (3) Haskett TL, Terpolilli JJ, Bekuma A, O'Hara GW, Sullivan JT, Wang P, Ronson CW, Ramsay JP. (2016) Assembly and transfer of tripartite integrative and conjugative genetic elements. Proc Natl Acad Sci U S A. 2016 Oct 25;113(43):12268-12273. [PubMed:27733511] |
| (4) Haskett TL, Ramsay JP, Bekuma AA, Sullivan JT, O'Hara GW, Terpolilli JJ. (2017) Evolutionary persistence of tripartite integrative and conjugative elements. Plasmid. 2017 Jul;92:30-36. [PubMed:28669811] |