Information of ICE
| ICEberg ID | 1071 |
|---|---|
| ICE Name | ICEVpaCan1 |
| ICEO ID | - |
| Organism | Vibrio parahaemolyticus S107-1 |
| Size | 81492 bp |
| GC Content (%) | - |
| Insertion site | - |
| Function | D Bacteriophage Exclusion D Phage defense system |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | CP028481 (complete ICE sequence in this genome) |
| Coordinates | 2625296..2706787 |
| Putative oriT region | coordinates: 75811..75917; oriTDB id: 200056 CCCCATCCAATTAACCCCAAAAGCCAAAACCACTATCCGTTTGGCTTTTGGATCGAAACG CCAAACGTAAAACTGCCGTAACAATCACTGTTTGGCGTCTCGATA |
| Putative relaxase | - |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICEVpaCan1 components from CP028481
Complete gene list of ICEVpaCan1 from CP028481
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICEVpaCan1 is not available.
| (1) Bioteau A, Durand R, Burrus V (2018) Redefinition and Unification of the SXT/R391 Family of Integrative and Conjugative Elements. Appl Environ Microbiol. 2018 Jun 18;84(13):e00485-18. [PubMed:29654185] |