Information of ICE
| ICEberg ID | 1068 |
|---|---|
| ICE Name | ICEVchNep1 |
| ICEO ID | ICEO_0000253 |
| Organism | Vibrio cholerae O1 VC504 |
| Size | 97350 bp |
| GC Content (%) | 46.79 |
| Insertion site | - |
| Function | D Abortive infection/Phage exclusion systems R Aminoglycoside, Folate pathway antagonist, Phenicol, Sulphonamide D Bacteriophage Exclusion |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | KC886257 (complete ICE sequence in this GenBank file) |
| Coordinates | 528..97877 |
| Putative oriT region | coordinates: 5342..5448; oriTDB id: 200056 TCGAGACGCCAAACAGTGATTGTGACGGCAGTTTTACGTTTGGCGTTTCGATCCAAAAGC CAAACGGATAGTGGTTTTGGCTTTAGGGGTTAATTGGATGGGGAA |
| Putative relaxase | coordinates: 41896..44046; Family: MOBH |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICEVchNep1 components from KC886257
Complete gene list of ICEVchNep1 from KC886257
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICEVchNep1 is not available.
| (1) Marin MA, Fonseca EL, Andrade BN, Cabral AC, Vicente AC. (2014) Worldwide occurrence of integrative conjugative element encoding multidrug resistance determinants in epidemic Vibrio cholerae O1. PLoS One. 2014 Sep 29;9(9):e108728. [PubMed:25265418] |