Information of ICE
| ICEberg ID | 1065 |
|---|---|
| ICE Name | ICEVchHai2 |
| ICEO ID | - |
| Organism | Vibrio cholerae HC-1A2 |
| Size | 82795 bp |
| GC Content (%) | 45.8 |
| Insertion site | - |
| Function | D Abortive infection/Phage exclusion systems D Bacteriophage Exclusion |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | AJRO01000008 (complete ICE sequence in this contig) |
| Coordinates | 45958..128752 |
| Putative oriT region | coordinates: 5621..5727; oriTDB id: 200056 TCGAGACGCCAAACAGTGATTGTTAGGGCAGTTTTACGTTTGGCGTTTCGATCCAAAAGC CAAACGGATAGTGGTTTTGGCTTTTGGGGTTAATTGGATGGGGAA |
| Putative relaxase | coordinates: 72033..74183; Family: MOBH |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICEVchHai2 components from AJRO01000008
Complete gene list of ICEVchHai2 from AJRO01000008
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICEVchHai2 is not available.
| (1) Ceccarelli D, Spagnoletti M, Hasan NA, Lansing S, Huq A, Colwell RR. (2013) A new integrative conjugative element detected in Haitian isolates of Vibrio cholerae non-O1/non-O139. Res Microbiol. 2013 Nov;164(9):891-893. [PubMed:23994142] |
| (2) Carraro N, Rivard N, Ceccarelli D, Colwell RR, Burrus V. (2016) IncA/C Conjugative Plasmids Mobilize a New Family of Multidrug Resistance Islands in Clinical Vibrio cholerae Non-O1/Non-O139 Isolates from Haiti. mBio. 2016 Jul 19;7(4):e00509-16. [PubMed:27435459] |