Information of ICE
| ICEberg ID | 1061 |
|---|---|
| ICE Name | ICEVchCHN57 |
| ICEO ID | - |
| Organism | Vibrio cholerae ICDC-57 |
| Size | 96186 bp |
| GC Content (%) | 46.24 |
| Insertion site | - |
| Function | D Abortive infection/Phage exclusion systems R Aminoglycoside, Folate pathway antagonist, Sulphonamide, Tetracycline D Bacteriophage Exclusion |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | KT151664.1 (partial ICE sequence) |
| Coordinates | 1..96186 |
| Putative oriT region | coordinates: 90259..90365; oriTDB id: 200056 CCCCATCCAATTAACCCCTAAAGCCAAAACCACTATCCGTTTGGCTTTTGGATCGAAACG CCAAACGTAAAACTGCCGTCACAATCACTGTTTGGCGTCTCGATA |
| Putative relaxase | - |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICEVchCHN57 components from KT151664.1
Complete gene list of ICEVchCHN57 from KT151664.1
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICEVchCHN57 is not available.
| (1) Wang R, Yu D, Yue J, Kan B. (2016) Variations in SXT elements in epidemic Vibrio cholerae O1 El Tor strains in China. Sci Rep. 2016 Mar 9;6:22733. [PubMed:26956038] |