Information of ICE
| ICEberg ID | 1046 |
|---|---|
| ICE Name | ICEValHN492 |
| ICEO ID | - |
| Organism | Vibrio alginolyticus HN492 |
| Size | 106164 bp |
| GC Content (%) | 46.04 |
| Insertion site | prfC |
| Function | - |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | KT072769 (complete ICE sequence in this GenBank file) |
| Coordinates | 1..106164 |
| Putative oriT region | coordinates: 5724..5830; oriTDB id: 200056 TCGAGACGCCAAACAGTGATTGTTACGGCAGTTTTACGTTTGGCGTTTCGATCCAAAAGC CAAACGGATAGTGGTTTTGGCTTTCGGGGTTAATTGGATGGGGAA |
| Putative relaxase | coordinates: 38257..40395; Family: MOBH |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICEValHN492 components from KT072769
Complete gene list of ICEValHN492 from KT072769
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICEValHN492 is not available.
| (1) Luo P, He X, Wang Y, Liu Q, Hu C. (2016) Comparative genomic analysis of six new-found integrative conjugative elements (ICEs) in Vibrio alginolyticus. BMC Microbiol. 2016 May 4;16:79. [PubMed:27145747] |