Information of ICE
| ICEberg ID | 1045 |
|---|---|
| ICE Name | ICEValHN437 |
| ICEO ID | - |
| Organism | Vibrio alginolyticus HN437 |
| Size | 94290 bp |
| GC Content (%) | 46.44 |
| Insertion site | tRNA-ser |
| Function | D Restriction-Modification V Virulence factor |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | KT072771 (complete ICE sequence in this GenBank file) |
| Coordinates | 1..94290 |
| Putative oriT region | coordinates: 3664..3770; oriTDB id: 200056 TCGAGACGCCAAACAGTGATTGCTACGGCAGTTTTACGTTTGGCGTTTCGATCCAAAAGC CAAACGGATAGTGGTTTTGGCTTTTGGGGTTAATTGGATGGGGAA |
| Putative relaxase | coordinates: 19934..22084; Family: MOBH |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICEValHN437 components from KT072771
Complete gene list of ICEValHN437 from KT072771
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICEValHN437 is not available.
| (1) Luo P, He X, Wang Y, Liu Q, Hu C. (2016) Comparative genomic analysis of six new-found integrative conjugative elements (ICEs) in Vibrio alginolyticus. BMC Microbiol. 2016 May 4;16:79. [PubMed:27145747] |