Information of ICE
| ICEberg ID | 1044 |
|---|---|
| ICE Name | ICEValHN396 |
| ICEO ID | - |
| Organism | Vibrio alginolyticus HN396 |
| Size | 86687 bp |
| GC Content (%) | 46.49 |
| Insertion site | tRNA-ser |
| Function | D PsyrTA D Restriction-Modification |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | KT072770 (complete ICE sequence in this GenBank file) |
| Coordinates | 1..86687 |
| Putative oriT region | coordinates: 3663..3769; oriTDB id: 200056 TCGAGACGCCAAACAGTGATTGTTACGGCAGTTTTACGTTTGGCGTTTCGATCCAAAAGC CAAACGGATAGTGGTTTTGGCTTTTGGGGTTAATTGGATGGGGAA |
| Putative relaxase | coordinates: 27634..29784; Family: MOBH |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICEValHN396 components from KT072770
Complete gene list of ICEValHN396 from KT072770
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
|---|
The interaction information of ICEValHN396 is not available.
| (1) Luo P, He X, Wang Y, Liu Q, Hu C. (2016) Comparative genomic analysis of six new-found integrative conjugative elements (ICEs) in Vibrio alginolyticus. BMC Microbiol. 2016 May 4;16:79. [PubMed:27145747] |