Information of ICE
ICEberg ID | 1043 |
---|---|
ICE Name | ICEValE0601 |
ICEO ID | - |
Organism | Vibrio alginolyticus E0601 |
Size | 106165 bp |
GC Content (%) | 46.04 |
Insertion site | prfC |
Function | - |
Species that ICE can be transferred to | - |
Nucleotide Sequence | KT072768 (complete ICE sequence in this GenBank file) |
Coordinates | 1..106165 |
Putative oriT region | coordinates: 5724..5830; oriTDB id: 200056 TCGAGACGCCAAACAGTGATTGTTACGGCAGTTTTACGTTTGGCGTTTCGATCCAAAAGC CAAACGGATAGTGGTTTTGGCTTTCGGGGTTAATTGGATGGGGAA |
Putative relaxase | coordinates: 38216..40396; Family: MOBH |
Function tags R Antibiotic resistance V Virulence factor M Metal resistance D Defense system G Degradation S Symbiosis
The graph information of ICEValE0601 components from KT072768
Complete gene list of ICEValE0601 from KT072768
# | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | Reannotation | Rea |
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The interaction information of ICEValE0601 is not available.
(1) Luo P, He X, Wang Y, Liu Q, Hu C. (2016) Comparative genomic analysis of six new-found integrative conjugative elements (ICEs) in Vibrio alginolyticus. BMC Microbiol. 2016 May 4;16:79. [PubMed:27145747] |